Pricing
Pricing is based on either a per plate or per sample basis, depending on the product selected.
For Genome-wide association projects with more than 94 samples, the pricing includes our SNP barcode test panel (96 snps used to barcode the sample and verify the GWAS dataset released matches the sample submitted, as well as used to verify gender, family relationships, sample performance - can also be used to verify 3 main ethnic groups if desired). We will identify problems and allow replacement samples before running the sample on the GWAS arrays. Also included in the pricing are two HapMap controls per 96 well plate and 1 blind duplicate every other plate. Also included in the pricing is repetition of any sample which has less than a 96.5% call rate for an Illumina array. We attempt the GWAS assay only twice.
For all other genotyping products, each plate can hold up to 92 samples (90 unique samples, 2 duplicates). Four wells on each plate are reserved for internal controls. No discounts will be given for partially filled plates. Products priced on a per sample basis must meet minimum sample requirements. One internal control will be supplied per 23 customer supplied samples. We are able to combine small projects to meet minimum sample requirements, but this is dependent on the availability of another project of the same type. Barcoding is not included with these products, but is available at an additional charge.
| Genome Wide Association Products: | |||
| Product | Number of samples | Price Per Sample | Minimum Sample Number |
| 660W-Quad | 46 or 94 | $495 | Samples must be in multiples of 46 or 47 |
| 140 - 564 | $450 | ||
| 610 - 1880 | $432 | ||
| 1880+ | $414 | ||
| 1M-Duo | 23 - 94 | $625 | Samples must be in multiples of 23 or 47 |
| 117 - 564 | $570 | ||
| 587 - 1880 | $548 | ||
| 1880+ | $525 | ||
| Affymetrix 6.0 | 46+ | $625 | 46 |
| Human Linkage: | |||
| Product | Number of SNPs | Price Per Sample | Minimum Sample Number |
| Human Whole Genome | 6090 | $200 | 46 |
| Mouse Linkage: | |||
| Product | Number of SNPs | Price Per Plate | Minimum Sample Number |
| Mouse Low Density Linkage | 377 | $6,300 | 82 |
| Mouse Medium Density Linkage | 1449 | $8,200 | 82 |
| Other Fixed Content Products: | |||
| Product | Number of SNPs | Price Per Plate | Minimum Sample Number |
| African-American Admixture | 1509 | $8,200 | 90 |
| Cancer SNP Panel | 1421 | $8,200 | 90 |
| DNA Fingerprinting w/genotypes returned | 96 | $45/sample | 1, but sample numbers less than 90 will be held until they can be combined with other studies. |
| DNA Fingerprinting, no genotypes returned | 96 | $25/sample | |
| DNA Test Panel | 360 | $6,300 | 90 |
| HumanCVD Beadchip | 49,000 | $300 | 46 |
| MHC Panel | 1200 | $8,200 | 90 |
| Custom SNP Panels: | |||
| Number of SNPs | Number of Samples | Genotyping costs per plate | Oligo Costs |
| 48 | 1 plate (90 samples) | $6,800 | included in genotyping |
| 2-5 plates | $4,500 | ||
| 6-9 plates | $3,800 | ||
| 10+ plates | $3,500 | ||
| 96 | 1 plate (90 samples) | $7,500 | included in genotyping |
| 2-5 plates | $5,000 | ||
| 6-9 plates | $4,100 | ||
| 10+ plates | $3,800 | ||
| 144 | 1 plate (90 samples) | $9,500 | included in genotyping |
| 2-5 plates | $5,800 | ||
| 6-9 plates | $4,600 | ||
| 10+ plates | $4,200 | ||
| 192 | 1 plate (90 samples) | $11,500 | included in genotyping |
| 2-5 plates | $6,800 | ||
| 6-9 plates | $5,300 | ||
| 10+ plates | $4,700 | ||
| 384 | 1 plate (90 samples) | $17,500 | included in genotyping |
| 2-5 plates | $9,500 | ||
| 6-9 plates | $5,800 | ||
| 10+ plates | $5,000 | ||
| 768 | 450+ | $6,700 | Additional; please inquire |
| 1536 | 450+ | $7,500 | Additional; please inquire |
| 6000+ | 1152 + | Please inquire | included in genotyping |
| Methylation: | |||
| Product | Number of CpG islands | Price per plate | Minimum Sample Number |
| Cancer Panel I | 1505 | $8,000 | 90 |
| Custom Methylation Panel | 1536 | $6,000+ cost of oligos | 90 |
| HumanMethylation27 Chip | 27,578 | $400/sample | 46 |
GenomeStudio License: $2000 for internal JHU customers of the SNP Center only, does not include Methylation module